STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15841.1Isonitrile hydratase. (224 aa)    
Predicted Functional Partners:
ADP15840.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 15.
 
    
0.670
ADP19101.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 37.
 
     0.603
ADP17058.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 22.
 
     0.587
ADP18157.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 30.
 
     0.478
ADP13519.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 2.
 
 
 0.464
ADP15689.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 12.
 
 
 0.403
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.