STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP15949.12-oxoisovalerate dehydrogenase subunit alpha. (410 aa)    
Predicted Functional Partners:
bkdA
2-oxoisovalerate dehydrogenase, E1 component, beta subunit.
 0.998
bkdB
Lipoamide acyltransferase component of branched-chain alpha-keto aciddehydrogenase complex.
 
 0.998
acoB
TPP-dependent acetoin dehydrogenase beta-subunit.
 0.995
lpdA2
Dihydrolipoyl dehydrogenase 2.
 
 
 0.986
lpdA3
Dihydrolipoyl dehydrogenase 3.
 
 0.983
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.913
ADP14845.1
Aminotransferase class IV family protein 1.
  
 
 0.913
ADP19454.1
L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
     
 0.904
pdhC
Branched-chain alpha-keto acid dehydrogenase subunit E2.
 
 0.899
lpdA5
Dihydrolipoyl dehydrogenase 5.
 
 
 0.887
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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