STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP15961.1Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein 1. (308 aa)    
Predicted Functional Partners:
ADP15962.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein 2.
 
  
 
0.978
kynB
Arylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
    
  0.806
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
     
  0.800
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
 
  
 0.687
ADP18189.1
Hydratase/decarboxylase family protein 2.
 
  
 0.661
garL1
2-dehydro-3-deoxyglucarate aldolase 1; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.556
garL2
2-dehydro-3-deoxyglucarate aldolase 2; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.556
hpaI
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.556
ADP14405.1
Cytosine-specific methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
  
     0.546
ADP17492.1
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit A.
  
  
 0.523
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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