Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADP15973.1Bacterial regulatory helix-turn-helix protein, LysR family protein 80; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
ADP15691.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 61; Belongs to the LysR transcriptional regulatory family.
  
     0.697
ADP15882.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 73; Belongs to the LysR transcriptional regulatory family.
  
     0.633
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.622
ADP17410.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 133; Belongs to the LysR transcriptional regulatory family.
  
     0.567
ADP15972.1
Major facilitator superfamily protein 24.
       0.553
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.506
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.476
ADP13711.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 10; Belongs to the LysR transcriptional regulatory family.
  
     0.464
ADP15891.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 74; Belongs to the LysR transcriptional regulatory family.
  
     0.452
ADP17597.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 142; Belongs to the LysR transcriptional regulatory family.
  
     0.437
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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