STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gspFGeneral secretion pathway protein F. (401 aa)    
Predicted Functional Partners:
gspE
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.992
gspG
General secretion pathway protein G.
 
  
 0.971
ADP15483.1
Type II/IV secretion system family protein 1.
 
 
 0.965
gspI
General secretion pathway protein I.
 
  
 0.959
pilD
Type 4 prepilin-like protein leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.943
gspD
General secretion pathway protein D.
 
  
 0.939
gspH
General secretion pathway protein H.
 
  
 0.867
ADP17216.1
DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.758
gspK
General secretion pathway protein K.
 
   
 0.735
ADP15987.1
Prepilin-type N-terminal cleavage/methylation domain protein 2.
 
  
 0.717
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.