STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16011.1ABC transporter family protein 40. (251 aa)    
Predicted Functional Partners:
ADP16009.1
Inner-membrane translocator 31; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.950
ADP16010.1
Inner-membrane translocator 32; Belongs to the binding-protein-dependent transport system permease family.
  
 0.944
ADP16008.1
Receptor family ligand binding region family protein 14.
 
  
 0.935
braG1
High-affinity branched-chain amino acid transport ATP-binding protein BRAG 1.
 
  
0.875
leuC2
3-isopropylmalate dehydratase large subunit 2.
 
     0.825
leuD2
3-isopropylmalate dehydratase small subunit 2; Belongs to the LeuD family.
 
     0.815
ADP16017.1
Isochorismatase family protein 8.
 
    0.803
cheA1
CheA signal transduction histidine kinase 1.
 
     0.801
ADP16018.1
FAD binding domain protein 6.
 
     0.800
hyuA
Hydantoin utilization protein A.
 
     0.795
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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