STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16018.1FAD binding domain protein 6. (465 aa)    
Predicted Functional Partners:
ADP16017.1
Isochorismatase family protein 8.
 
    0.934
ADP16008.1
Receptor family ligand binding region family protein 14.
 
  
 0.922
cheA1
CheA signal transduction histidine kinase 1.
 
     0.904
ADP16019.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.897
hyuA
Hydantoin utilization protein A.
 
    0.885
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
 
 0.878
ADP14488.1
Succinate dehydrogenase, cytochrome b subunit.
 
 0.868
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
  
 0.854
ADP16007.1
Bacterial regulatory protein, GntR family protein 29.
 
    0.853
ADP14486.1
Succinate dehydrogenase and fumarate reductase iron-sulfur family protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.849
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.