STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16111.1Cupin domain protein 3. (138 aa)    
Predicted Functional Partners:
ADP14040.1
Hypothetical protein.
  
   
 0.653
ADP16110.1
Extra-cytoplasmic solute receptor family protein 54.
 
     0.646
ADP16109.1
CoA-transferase family III family protein 18; Belongs to the CoA-transferase III family.
 
     0.637
ADP16428.1
Hypothetical protein.
 
 
 0.630
acdC1
acyl-CoA dehydrogenase 1.
  
    0.597
ADP14276.1
Major facilitator superfamily protein 12.
  
   
 0.581
folC
Bifunctional protein FolC; Belongs to the folylpolyglutamate synthase family.
     
 0.573
thcB
Cytochrome P450.
 
 
 
 0.552
ADP14786.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 46; Belongs to the LysR transcriptional regulatory family.
  
    0.541
ADP13674.1
Polysaccharide deacetylase family protein 1.
 
   
 0.507
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.