STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16144.1NfeD-like family protein 1. (144 aa)    
Predicted Functional Partners:
ADP16145.1
SPFH domain/Band 7 family protein 1.
 
 
 0.870
hctB
Histone H1-like protein HC2.
  
     0.705
ADP17083.1
Hypothetical protein.
 
    0.681
ADP15109.1
Hypothetical protein.
  
     0.671
ADP19527.1
Hypothetical protein.
  
     0.662
ADP14582.1
Hypothetical protein.
  
     0.660
ADP16697.1
Gram-negative porin family protein 3.
  
     0.642
ADP14971.1
Hypothetical protein.
  
     0.638
ADP17206.1
Porin, Gram-negative type.
  
     0.638
ADP18096.1
NfeD-like family protein 2.
  
  
 0.593
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.