STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16169.1ABC transporter family protein 42. (253 aa)    
Predicted Functional Partners:
ADP16167.1
Inner-membrane translocator 35; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.952
ADP16168.1
Inner-membrane translocator 36; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.940
ADP16166.1
Receptor family ligand binding region family protein 16.
 
  
 0.900
livF2
High-affinity branched-chain amino acid transport ATP-binding protein LivF 2.
 
  
0.871
braD1
High-affinity branched-chain amino acid transport system permease protein BraD 1; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.616
ADP16171.1
Amidase family protein 8.
       0.551
ADP15226.1
Inner-membrane translocator 24; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.550
ADP18121.1
Inner-membrane translocator 47; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.550
ADP13885.1
Inner-membrane translocator 7; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.548
ADP13923.1
Inner-membrane translocator 9; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.536
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.