Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP16206.1Amidohydrolase family protein 13. (551 aa)    
Predicted Functional Partners:
ADP16207.1
CobW/HypB/UreG, nucleotide-binding domain protein 3.
     
 0.795
ADP16201.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 15.
 
     0.753
dppC5
Dipeptide transport system permease protein DppC 5.
 
     0.723
ADP16202.1
Binding-protein-dependent transport system inner membrane component family protein 32.
       0.688
ADP16204.1
Peptide ABC transporter ATP-binding protein 1; Belongs to the ABC transporter superfamily.
       0.688
ADP16205.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 5; Belongs to the ABC transporter superfamily.
       0.688
ADP16208.1
Short chain dehydrogenase family protein 27.
       0.474
ADP16200.1
Phosphate butyryltransferase 1.
     
 0.453
ADP16210.1
FAD dependent oxidoreductase family protein 6.
 
    0.439
ADP16209.1
snoaL-like polyketide cyclase family protein 3.
 
     0.437
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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