STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP16207.1CobW/HypB/UreG, nucleotide-binding domain protein 3. (323 aa)    
Predicted Functional Partners:
ADP16206.1
Amidohydrolase family protein 13.
     
 0.795
ADP16202.1
Binding-protein-dependent transport system inner membrane component family protein 32.
       0.688
dppC5
Dipeptide transport system permease protein DppC 5.
       0.688
ADP16204.1
Peptide ABC transporter ATP-binding protein 1; Belongs to the ABC transporter superfamily.
       0.688
ADP16205.1
Oligopeptide/dipeptide abc transporter, ATP-binding protein, c-terminal domain protein 5; Belongs to the ABC transporter superfamily.
       0.688
ADP16201.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 15.
     
 0.670
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
 
 
 0.667
folE1
GTP cyclohydrolase 1; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
  
 0.586
dksA
RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
  
  
 0.584
ADP19544.1
Periplasmic solute binding family protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.583
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.