STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16217.1Periplasmic sensor signal transduction histidine kinase 1. (472 aa)    
Predicted Functional Partners:
ADP16216.1
Response regulator 7.
 
   
 0.951
ADP15583.1
Response regulator 5.
 
   
 0.763
ADP19333.1
Response regulator 19.
 
   
 0.751
ADP16287.1
Transcriptional regulatory protein DegU.
 
   
 0.742
rcsB
Capsular synthesis regulator component B.
 
   
 0.735
ADP19318.1
Bacterial regulatory protein, LuxR family protein 12.
 
   
 0.733
ADP17811.1
Bacterial regulatory protein, LuxR family protein 10.
 
   
 0.707
ADP13788.1
Bacterial regulatory protein, LuxR family protein 1.
 
   
 0.665
ADP19315.1
Response regulator 18.
 
   
 0.605
folE2
GTP cyclohydrolase 2.
       0.527
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.