Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16286.1HAMP domain protein 9. (646 aa)    
Predicted Functional Partners:
ADP16287.1
Transcriptional regulatory protein DegU.
 
 0.996
narJ
Nitrate reductase molybdenum cofactor assembly chaperone.
 
   
 0.803
narI
Respiratory nitrate reductase, gamma subunit.
 
  
 0.780
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B.
 
   
 0.743
ADP16295.1
Sterol-binding domain protein.
 
    0.732
ADP16276.1
Nitrate/nitrite transporter.
 
  
 0.721
ADP16278.1
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.698
ADP17811.1
Bacterial regulatory protein, LuxR family protein 10.
 
 
 0.691
ADP16216.1
Response regulator 7.
 
 
 0.688
narH
Nitrate reductase, beta subunit.
 
  
 0.680
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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