STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16289.1GMC oxidoreductase family protein 1. (537 aa)    
Predicted Functional Partners:
ADP16291.1
Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein.
  
    0.804
ADP16290.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 11.
     
 0.783
ADP16288.1
Extra-cytoplasmic solute receptor family protein 58.
       0.664
ADP16292.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 85; Belongs to the LysR transcriptional regulatory family.
       0.505
ADP18882.1
Variant SH3 domain protein.
    
 0.490
ADP17177.1
Transcriptional regulatory protein family protein 1.
   
 0.431
ADP16160.1
Ankyrin repeat family protein 1.
    
 0.411
ADP18591.1
Ankyrin repeat family protein 2.
    
 0.411
ADP19035.1
Ankyrin repeat family protein 3.
    
 0.411
ADP14591.1
Tetratricopeptide repeat family protein 4.
    
 0.408
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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