Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16291.1Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain protein. (177 aa)    
Predicted Functional Partners:
ADP16290.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 11.
 
   
 0.928
ADP16289.1
GMC oxidoreductase family protein 1.
  
    0.804
ADP13444.1
Restriction endonuclease family protein 1.
   
    0.772
topB1
DNA topoisomerase III 1.
   
    0.772
ADP16288.1
Extra-cytoplasmic solute receptor family protein 58.
  
    0.672
maeB1
NADP-dependent malic enzyme 1.
   
    0.519
maeB2
NADP-dependent malic enzyme 2.
   
    0.519
maeB3
NADP-dependent malic enzyme 3.
   
    0.519
ADP16292.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 85; Belongs to the LysR transcriptional regulatory family.
  
    0.515
fdxH
Formate dehydrogenase, beta subunit.
   
    0.489
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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