Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16292.1Bacterial regulatory helix-turn-helix protein, LysR family protein 85; Belongs to the LysR transcriptional regulatory family. (316 aa)    
Predicted Functional Partners:
ADP18088.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 156; Belongs to the LysR transcriptional regulatory family.
  
     0.736
ADP17051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 121; Belongs to the LysR transcriptional regulatory family.
  
     0.729
ADP13807.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 14; Belongs to the LysR transcriptional regulatory family.
  
     0.711
ADP19051.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 185; Belongs to the LysR transcriptional regulatory family.
  
     0.711
ADP16519.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 97; Belongs to the LysR transcriptional regulatory family.
  
     0.707
ADP18353.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 165; Belongs to the LysR transcriptional regulatory family.
  
     0.700
ADP16445.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 95; Belongs to the LysR transcriptional regulatory family.
  
     0.693
catR1
HTH-type transcriptional regulator CatR 1; Belongs to the LysR transcriptional regulatory family.
  
     0.690
ADP18810.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 176; Belongs to the LysR transcriptional regulatory family.
  
     0.689
ADP15744.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 64; Belongs to the LysR transcriptional regulatory family.
  
     0.687
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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