STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16313.1PAAR motif family protein 1. (118 aa)    
Predicted Functional Partners:
ADP19007.1
Rhs element Vgr family protein 3.
 
   
 0.832
ADP18997.1
Rhs element Vgr family protein 2.
 
   
 0.818
ADP18996.1
Type IV/VI secretion system protein, DotU family domain protein.
 
  
 0.814
ADP18994.1
Hypothetical protein.
 
  
 0.811
ADP18995.1
Hypothetical protein.
 
  
 0.797
ADP19009.1
D-alanyl-D-alanine carboxypeptidase family protein 2.
 
  
 0.797
ADP18985.1
Rhs element Vgr family protein 1.
 
   
 0.791
ADP19011.1
Hypothetical protein.
 
   
 0.791
ADP18990.1
Type VI secretion system effector, Hcp1 family protein.
 
   
 0.784
ADP18989.1
Type VI secretion system, lysozyme-related family protein 1.
 
  
 0.779
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.