Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP16331.1Short chain dehydrogenase family protein 29. (259 aa)    
Predicted Functional Partners:
ADP16332.1
AMP-binding enzyme family protein 13.
  
   0.798
ADP16333.1
Binding-protein-dependent transport system inner membrane component family protein 33.
       0.701
ADP16334.1
Binding-protein-dependent transport system inner membrane component family protein 34.
       0.701
ADP16335.1
Bacterial extracellular solute-binding protein, family 5 middle family protein 16.
       0.701
ADP16337.1
Zinc-binding dehydrogenase family protein 4.
  
 
 0.651
ADP16336.1
Thioesterase superfamily protein 9.
  
  
 0.635
ADP16339.1
Hypothetical protein.
   
 
 0.572
ADP16338.1
Hypothetical protein.
       0.534
ADP18298.1
Short chain dehydrogenase family protein 50; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.501
acpP2
Acyl carrier protein 2; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
 
 
 0.476
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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