STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16347.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
cbl
HTH-type transcriptional regulator cbl; Belongs to the LysR transcriptional regulatory family.
       0.779
metC2
Cystathionine beta-lyase 2.
  
  
 0.529
ADP16349.1
Rhodanese-like domain protein 2.
  
  
 0.519
nuoI
NADH-quinone oxidoreductase subunit 9; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.480
ADP16343.1
Amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 7.
       0.406
ADP16344.1
Amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family domain protein 8.
       0.406
ADP16345.1
ABC transporter family protein 43.
       0.406
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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