STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cblHTH-type transcriptional regulator cbl; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
ADP16347.1
Hypothetical protein.
       0.779
ADP19164.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 192; Belongs to the LysR transcriptional regulatory family.
  
     0.582
ADP16828.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 108; Belongs to the LysR transcriptional regulatory family.
  
     0.575
ADP16445.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 95; Belongs to the LysR transcriptional regulatory family.
  
     0.537
ADP16349.1
Rhodanese-like domain protein 2.
  
  
 0.530
ADP17645.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 143; Belongs to the LysR transcriptional regulatory family.
  
     0.528
ADP16604.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 98; Belongs to the LysR transcriptional regulatory family.
  
     0.527
metC2
Cystathionine beta-lyase 2.
  
  
 0.523
ADP15135.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 52; Belongs to the LysR transcriptional regulatory family.
  
     0.521
ADP15907.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 76; Belongs to the LysR transcriptional regulatory family.
  
     0.521
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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