STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16388.1LucA/LucC family protein. (618 aa)    
Predicted Functional Partners:
alcB
Alcaligin biosynthesis protein.
  
 0.999
alcA
Alcaligin biosynthesis enzyme.
 
  
 0.974
ADP16387.1
Hypothetical protein.
 
   
 0.938
ADP15920.1
L-ornithine 5-monooxygenase.
 
  
 0.769
ADP16386.1
Rieske [2Fe-2S] domain protein 6.
     
 0.715
ADP16385.1
Bacterial regulatory helix-turn-helix protein, AraC family protein 16.
 
   
 0.578
ADP16379.1
Ferric enterobactin transport ATP-binding protein FepC.
 
  
 0.487
cysM
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.471
ADP16382.1
Periplasmic binding family protein 2.
 
  
 0.440
ADP16383.1
TonB-dependent siderophore receptor family protein 9.
  
  
 0.439
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.