STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
alcAAlcaligin biosynthesis enzyme. (468 aa)    
Predicted Functional Partners:
ADP16388.1
LucA/LucC family protein.
 
  
 0.974
alcB
Alcaligin biosynthesis protein.
 
  
 0.966
ADP16387.1
Hypothetical protein.
 
     0.858
mbtH
Protein MbtH.
  
  
 0.803
ADP15926.1
Cyclic peptide transporter family protein.
 
  
 0.769
ADP15918.1
Syringomycin synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.723
ADP15924.1
Pyoverdine synthetase F.
  
  
 0.722
ADP15917.1
Linear gramicidin synthetase subunit C.
 
 
 0.647
ADP16386.1
Rieske [2Fe-2S] domain protein 6.
       0.633
ADP15916.1
Amino acid adenylation domain protein 2.
 
 
 0.624
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.