STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
icd2Isocitrate dehydrogenase, NADP-dependent 2; Belongs to the monomeric-type IDH family. (742 aa)    
Predicted Functional Partners:
acnA1
Aconitate hydratase 1; Belongs to the aconitase/IPM isomerase family.
 
 
 0.953
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
  
 0.944
icd1
Isocitrate dehydrogenase, NADP-dependent 1.
    
 0.929
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
   
 
 0.923
acnA2
Aconitate hydratase 2; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.920
acnA3
Aconitate hydratase 3.
  
 
 0.920
acnA4
Aconitate hydratase 4; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.920
ADP13567.1
Ferredoxin-dependent glutamate synthase.
     
 0.882
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.845
ADP16177.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.838
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.