STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kdgD5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. (304 aa)    
Predicted Functional Partners:
ADP17670.1
Dihydrodipicolinate synthetase family protein 4; Belongs to the DapA family.
  
  
 
0.918
garL1
2-dehydro-3-deoxyglucarate aldolase 1; Belongs to the HpcH/HpaI aldolase family.
    
  0.903
garL2
2-dehydro-3-deoxyglucarate aldolase 2; Belongs to the HpcH/HpaI aldolase family.
    
  0.903
dapA3
Dihydrodipicolinate synthase 3; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
     0.632
dapA1
Dihydrodipicolinate synthase 1; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
     0.619
ADP16401.1
Hypothetical protein.
       0.607
ADP13831.1
D-galactarate dehydratase/altronate hydrolase family protein 1.
    
 0.581
ADP14869.1
D-galactarate dehydratase/altronate hydrolase family protein 3.
    
 0.581
ADP18847.1
D-galactarate dehydratase/altronate hydrolase family protein 4.
    
 0.581
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
  
 0.578
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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