Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16414.1TRAP transporter, DctM subunit 5. (427 aa)    
Predicted Functional Partners:
ADP16416.1
TRAP transporter solute receptor, DctP family protein 4.
 
 
 0.995
ADP16415.1
TRAP dicarboxylate transporter, DctQ subunit.
 
 
 0.941
ADP17629.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 10.
 
 
 0.861
ADP16412.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 5; Belongs to the TPP enzyme family.
    
  0.824
ADP15316.1
TRAP transporter solute receptor, DctP family protein 1.
  
 0.819
ADP15355.1
TRAP transporter solute receptor, DctP family protein 2.
 
  
 0.819
ADP15570.1
TRAP transporter solute receptor, DctP family protein 3.
 
  
 0.819
ADP17630.1
TRAP transporter solute receptor, DctP family protein 7.
 
  
 0.819
ADP17931.1
Bacterial extracellular solute-binding protein, family 7 family protein 4.
 
  
 0.819
ADP17168.1
TRAP transporter solute receptor, DctP family protein 5.
  
 0.818
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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