STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16415.1TRAP dicarboxylate transporter, DctQ subunit. (159 aa)    
Predicted Functional Partners:
ADP16416.1
TRAP transporter solute receptor, DctP family protein 4.
 
  
 0.949
ADP16414.1
TRAP transporter, DctM subunit 5.
 
 
 0.941
ADP16413.1
HpcH/HpaI aldolase/citrate lyase family protein 2; Belongs to the HpcH/HpaI aldolase family.
 
    0.821
ADP16412.1
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 5; Belongs to the TPP enzyme family.
  
    0.795
puuC
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.742
ADP16411.1
N-carbamyl-L-cysteine amidohydrolase 1.
       0.742
ADP15316.1
TRAP transporter solute receptor, DctP family protein 1.
 
  
 0.729
ADP15315.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 1.
  
     0.719
ADP15314.1
TRAP transporter, DctM subunit 1.
 
 
 0.710
ADP15355.1
TRAP transporter solute receptor, DctP family protein 2.
 
  
 0.697
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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