STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16418.1Oligopeptide transport ATP-binding protein OppF. (270 aa)    
Predicted Functional Partners:
ADP16420.1
Binding-protein-dependent transport system inner membrane component family protein 35.
 
 0.955
ADP16421.1
Binding-protein-dependent transport system inner membrane component family protein 36.
 
 
 0.945
ADP16419.1
Peptide ABC transporter ATP-binding protein 2; Belongs to the ABC transporter superfamily.
 
  
0.874
ADP15576.1
Binding-protein-dependent transport system inner membrane component family protein 28.
 
 0.837
dppC5
Dipeptide transport system permease protein DppC 5.
 
 0.837
ADP16333.1
Binding-protein-dependent transport system inner membrane component family protein 33.
 
 0.822
ADP17588.1
Oligopeptide transport system permease protein APPC.
 
 0.816
ADP14926.1
Binding-protein-dependent transport system inner membrane component family protein 25.
 
 0.815
ADP16899.1
Binding-protein-dependent transport system inner membrane component family protein 43.
 
 0.814
gsiD2
Glutathione transport system permease protein GsiD 2.
 
 0.809
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.