Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16425.1Response regulator 8. (412 aa)    
Predicted Functional Partners:
ADP19359.1
Diguanylate cyclase, GGDEF domain protein 20.
  
 0.907
ADP15266.1
Diguanylate cyclase, GGDEF domain protein 5.
  
 0.902
ADP16006.1
Sensory box protein 4.
 
 0.900
ADP16613.1
Sensory box protein 7.
 
 0.898
ADP14689.1
Sensory box protein 3.
 
 0.896
ADP17140.1
Diguanylate cyclase, GGDEF domain protein 15.
  
 0.842
ADP13940.1
Diguanylate cyclase, GGDEF domain protein 1.
 
  
 0.841
ADP14171.1
Diguanylate cyclase, GGDEF domain protein 2.
 
  
 0.841
ADP15350.1
Diguanylate cyclase, GGDEF domain protein 6.
  
 0.841
ADP15543.1
Diguanylate cyclase, GGDEF domain protein 7.
 
  
 0.841
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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