STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16444.1Isochorismatase family protein 9. (225 aa)    
Predicted Functional Partners:
ADP16435.1
Amidohydrolase family protein 14.
 
     0.706
ADP16443.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 94; Belongs to the LysR transcriptional regulatory family.
 
     0.679
ADP13380.1
Amidohydrolase family protein 1.
 
     0.665
ADP17429.1
Peroxiredoxin OsmC.
   
    0.463
ADP14322.1
Isochorismatase family protein 6.
  
     0.445
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.443
ADP19352.1
Helix-turn-helix family protein 17.
   
    0.433
ADP19396.1
Transcriptional regulator, XRE family domain protein.
   
    0.433
katA1
Catalase 1; Belongs to the catalase family.
  
 
 0.427
ADP17473.1
Catalase family protein.
  
 
 0.427
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.