STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pmtAPhospholipid N-methyltransferase PmtA. (210 aa)    
Predicted Functional Partners:
psd1
Phosphatidylserine decarboxylase 1; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
 0.919
psd2
Phosphatidylserine decarboxylase 2; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
 0.919
ADP19006.1
Phospholipase D active site motif protein 6.
     
 0.905
plcN1
Phospholipase C, phosphocholine-specific 1.
     
 0.903
plcN2
Phospholipase C, phosphocholine-specific 2.
     
 0.903
plcN3
Phospholipase C, phosphocholine-specific 3.
     
 0.903
plcN4
Phospholipase C, phosphocholine-specific 4.
     
 0.903
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.861
ADP17616.1
Membrane protein-like protein 4.
  
     0.547
ADP16457.1
Penicillin amidase family protein 2.
       0.508
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.