STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16462.1Tat pathway signal sequence domain protein 16. (338 aa)    
Predicted Functional Partners:
ADP16463.1
RNA polymerase sigma factor, sigma-70 family protein 5; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.960
ADP17390.1
RNA polymerase sigma factor, sigma-70 family protein 8; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.833
ADP17044.1
RNA polymerase sigma factor, sigma-70 family protein 7; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.832
ADP16264.1
RNA polymerase sigma factor, sigma-70 family protein 4; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.830
ADP17162.1
RNA polymerase sigma factor FecI 9; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.830
ADP18972.1
RNA polymerase sigma factor FecI 16; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.829
ADP15910.1
RNA polymerase sigma factor, sigma-70 family protein 3; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.826
ADP18060.1
RNA polymerase sigma factor FecI 10; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.826
ADP18629.1
RNA polymerase sigma factor FecI 14; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.826
ADP18635.1
RNA polymerase sigma factor, sigma-70 family protein 10; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.826
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.