Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ADP16488.1Polysaccharide deacetylase family protein 8. (300 aa)    
Predicted Functional Partners:
ADP16489.1
MmgE/PrpD family protein 1.
 
     0.874
ADP16486.1
CoA-transferase family III family protein 23; Belongs to the CoA-transferase III family.
 
     0.718
ADP16487.1
enoyl-CoA hydratase/isomerase family protein 12; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.693
ADP16485.1
Amidase family protein 9; Belongs to the amidase family.
       0.663
ADP16484.1
Hypothetical protein.
       0.647
hyuE
Hydantoin racemase.
 
     0.559
ADP16483.1
Bacterial regulatory protein, GntR family protein 36.
       0.469
ADP14768.1
Polysaccharide deacetylase family protein 3.
  
     0.452
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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