STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16489.1MmgE/PrpD family protein 1. (457 aa)    
Predicted Functional Partners:
ADP16488.1
Polysaccharide deacetylase family protein 8.
 
     0.874
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 
 0.737
ADP16487.1
enoyl-CoA hydratase/isomerase family protein 12; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.737
ADP16486.1
CoA-transferase family III family protein 23; Belongs to the CoA-transferase III family.
  
    0.709
ADP16485.1
Amidase family protein 9; Belongs to the amidase family.
       0.653
ADP14776.1
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 6.
 
  
 0.652
ADP16484.1
Hypothetical protein.
       0.647
acnD
2-methylisocitrate dehydratase, Fe/S-dependent.
  
 
 0.596
ADP14247.1
itaconyl-CoA hydratase.
  
  
 0.590
ADP16019.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.563
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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