Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP16512.1hipB1 domain protein. (114 aa)    
Predicted Functional Partners:
ADP16511.1
hipA-like C-terminal domain protein 1.
 
 
 
 0.980
ADP16510.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 96; Belongs to the LysR transcriptional regulatory family.
 
   
 0.802
ADP19136.1
HipA N-terminal domain protein 2.
 
 
 
 0.754
ADP15805.1
HipA N-terminal domain protein 1.
   
 
 0.712
ADP14714.1
Bacterial regulatory protein, LuxR family protein 5.
 
     0.624
ADP15437.1
Hypothetical protein.
  
     0.588
ADP13637.1
Hypothetical protein.
  
     0.582
ADP19018.1
Tetratricopeptide repeat family protein 13.
  
     0.578
ADP18404.1
DltD C-terminal domain protein.
  
     0.534
ADP16513.1
LD-carboxypeptidase family protein.
     
 0.529
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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