STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16513.1LD-carboxypeptidase family protein. (377 aa)    
Predicted Functional Partners:
ADP16514.1
S4 domain protein.
       0.740
ADP14822.1
Uracil DNA glycosylase superfamily protein.
  
    0.717
ADP18143.1
Class II aldolase and adducin N-terminal domain protein 7.
   
    0.672
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
 
   
 0.605
ADP18126.1
D-alanyl-D-alanine carboxypeptidase DacC 1; Belongs to the peptidase S11 family.
    
 0.546
rimI
Ribosomal-protein-alanine acetyltransferase.
  
    0.545
ADP16512.1
hipB1 domain protein.
     
 0.529
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
  
   
 0.525
ADP16510.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 96; Belongs to the LysR transcriptional regulatory family.
       0.514
ADP16511.1
hipA-like C-terminal domain protein 1.
       0.514
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.