STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16670.1EAL domain protein 4. (591 aa)    
Predicted Functional Partners:
ADP19334.1
Sensory box protein 11.
  
  
 0.904
ADP15543.1
Diguanylate cyclase, GGDEF domain protein 7.
 
  
 0.872
ADP16613.1
Sensory box protein 7.
 
 
 0.866
ADP14689.1
Sensory box protein 3.
 
 
 0.863
ADP13941.1
c-di-GMP phosphodiesterase A.
 
 
0.862
ADP16006.1
Sensory box protein 4.
 
 
 0.859
ADP15547.1
Diguanylate cyclase, GGDEF domain protein 9.
 
  
 0.818
ADP18822.1
Diguanylate cyclase, GGDEF domain protein 16.
 
  
 0.811
ADP13940.1
Diguanylate cyclase, GGDEF domain protein 1.
 
  
 0.809
ADP16146.1
Diguanylate cyclase, GGDEF domain protein 12.
 
  
 0.808
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.