STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16673.1MmgE/PrpD family protein 3. (458 aa)    
Predicted Functional Partners:
cobZ
Tricarballylate dehydrogenase.
 
  
 0.968
ADP18976.1
CitB domain protein.
  
    0.946
ADP18242.1
Hypothetical protein.
  
    0.915
ADP16672.1
acyl-CoA dehydrogenase, N-terminal domain protein 10.
 
  
 0.831
ADP14306.1
AMP-binding enzyme family protein 3.
  
  
 0.760
ADP16360.1
AMP-binding enzyme family protein 14.
  
  
 0.760
ADP18244.1
AMP-binding enzyme family protein 23.
  
  
 0.760
ADP13811.1
Fumarylacetoacetate (FAA) hydrolase family protein 1.
  
    0.755
ADP16440.1
Fumarylacetoacetate (FAA) hydrolase family protein 5.
  
    0.755
ADP17241.1
Fumarylacetoacetate (FAA) hydrolase family protein 7.
  
    0.755
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.