Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADP16683.1Cytochrome c family protein 8. (305 aa)    
Predicted Functional Partners:
ADP16682.1
Cytochrome c family protein 7.
  
 0.990
ADP18725.1
Sulfur oxidation protein 1.
   
 0.936
ADP18730.1
Sulfite-dehydrogenase.
   
 0.927
ADP18979.1
Cytochrome c family protein 10.
  
  
 
0.921
ADP18727.1
Sulfur oxidation protein SoxZ family protein.
    
 0.918
ADP18728.1
Tat pathway signal sequence domain protein 24.
    
 0.918
ADP15147.1
Rhodanese-like domain protein 1.
  
 
 0.910
ADP18723.1
5'-Nucleotidase domain protein; Belongs to the 5'-nucleotidase family.
    
 0.910
ADP18729.1
Cytochrome c-552 2.
  
 
 0.909
ADP18726.1
Sulfur oxidation protein 2.
     
  0.900
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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