Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADP16692.1Bacterial regulatory helix-turn-helix protein, MarR family protein 10. (169 aa)    
Predicted Functional Partners:
ADP16694.1
Bacterial extracellular solute-binding protein, family 7 family protein 1.
 
     0.773
ADP16695.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 5.
 
     0.753
ADP16691.1
5-oxoprolinase.
 
     0.746
ADP18334.1
Bacterial extracellular solute-binding protein, family 7 family protein 5.
 
     0.604
ADP16696.1
TRAP transporter, DctM subunit 6.
 
     0.527
nudC
NADH pyrophosphatase.
       0.498
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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