STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16708.1Tripartite ATP-independent periplasmic transporter, DctQ component family protein 6. (206 aa)    
Predicted Functional Partners:
ADP16706.1
Hypothetical protein.
 
    0.934
ADP16707.1
TRAP transporter, DctM subunit 7.
 
    0.884
ADP16709.1
Bacterial extracellular solute-binding protein, family 7 family protein 2.
 
   
 0.877
ADP16703.1
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
     0.711
allA
Ureidoglycolate hydrolase.
 
     0.657
ADP16704.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 102; Belongs to the LysR transcriptional regulatory family.
 
     0.654
ADP16695.1
Tripartite ATP-independent periplasmic transporter, DctQ component family protein 5.
  
     0.631
ADP16710.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 103; Belongs to the LysR transcriptional regulatory family.
  
     0.607
ADP16694.1
Bacterial extracellular solute-binding protein, family 7 family protein 1.
 
   
 0.548
ADP18334.1
Bacterial extracellular solute-binding protein, family 7 family protein 5.
 
   
 0.536
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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