STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16721.1Carboxypeptidase G2. (430 aa)    
Predicted Functional Partners:
ugpQ
Glycerophosphoryl diester phosphodiesterase.
  
  
 0.555
rlmJ
Hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
  
    0.534
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
 
 
 0.482
ADP18626.1
Bacterial regulatory protein, GntR family protein 57.
 
     0.445
ppiD
Peptidyl-prolyl cis-trans isomerase.
   
 
 0.427
ADP16629.1
Aspartate racemase family protein 2; Belongs to the aspartate/glutamate racemases family.
 
     0.409
ADP16111.1
Cupin domain protein 3.
 
    0.404
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.