STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16743.1ABC transporter, substrate binding protein 2. (268 aa)    
Predicted Functional Partners:
ADP16745.1
NMT1/THI5 like family protein 4.
 
   
 0.779
dltD
Poly(glycerophosphate chain) D-alanine transfer protein.
  
   
 0.763
ADP16744.1
Binding-protein-dependent transport system inner membrane component family protein 39.
       0.736
ADP15175.1
Hypothetical protein.
  
     0.733
ADP14562.1
PmgT domain protein.
  
     0.721
ADP15326.1
Hypothetical protein.
  
     0.710
ADP13426.1
NMT1/THI5 like family protein 1.
 
   
 0.703
ADP18952.1
Meta/HslJ family protein 3.
  
     0.689
ADP18404.1
DltD C-terminal domain protein.
  
   
 0.671
ADP15480.1
Lipoprotein 1.
  
   
 0.657
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.