STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16747.1CoA-transferase family III family protein 24; Belongs to the CoA-transferase III family. (413 aa)    
Predicted Functional Partners:
gcdH
glutaryl-CoA dehydrogenase.
 
 
  0.928
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
     
 0.900
ADP16749.1
Nodulation protein N.
  
 
 0.670
gabD1
Succinate-semialdehyde dehydrogenase [NADP+] 1.
    
  0.656
gabD2
Succinate-semialdehyde dehydrogenase [NADP+] 2; Belongs to the aldehyde dehydrogenase family.
    
  0.656
ADP17789.1
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.656
ADP18712.1
Aldehyde dehydrogenase family protein 3.
    
  0.656
gabD3
Succinate-semialdehyde dehydrogenase [NADP+] 3; Belongs to the aldehyde dehydrogenase family.
    
  0.656
gabD4
Succinate-semialdehyde dehydrogenase [NADP+] 4.
    
  0.656
ADP16750.1
enoyl-CoA hydratase/isomerase family protein 14; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.653
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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