STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16779.1acyl-CoA dehydrogenase, middle domain protein 8. (597 aa)    
Predicted Functional Partners:
fadN
3-hydroxyacyl-CoA dehydrogenase.
  
 0.709
ADP16970.1
enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.705
ADP17817.1
enoyl-CoA hydratase/isomerase family protein 22.
  
 0.705
fadJ1
Fatty acid oxidation complex subunit alpha 1; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.705
fadJ2
Fatty acid oxidation complex subunit alpha 2; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.705
ADP13474.1
Carboxyl transferase domain protein 1.
  
 
 0.666
ADP18451.1
methylcrotonoyl-CoA carboxylase beta subunit.
  
 
 0.666
ADP16780.1
CoA-transferase family III family protein 27; Belongs to the CoA-transferase III family.
  
 
  0.649
ADP16777.1
RecF/RecN/SMC N terminal domain protein.
  
    0.636
ADP16778.1
Calcineurin-like phosphoesterase family protein 7.
       0.628
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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