STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADP16798.1Bacterial regulatory helix-turn-helix protein, LysR family protein 107; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
ADP19110.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 189; Belongs to the LysR transcriptional regulatory family.
  
     0.680
ADP13807.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 14; Belongs to the LysR transcriptional regulatory family.
  
     0.667
ADP16292.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 85; Belongs to the LysR transcriptional regulatory family.
  
     0.626
ADP18389.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 166; Belongs to the LysR transcriptional regulatory family.
  
     0.593
ADP16797.1
Extra-cytoplasmic solute receptor family protein 76.
       0.541
ADP13523.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 7; Belongs to the LysR transcriptional regulatory family.
  
     0.524
ADP15891.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 74; Belongs to the LysR transcriptional regulatory family.
  
     0.476
ADP16796.1
malate/L-lactate dehydrogenase family protein 2; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.476
ADP18740.1
HTH-type transcriptional regulator TrpI 1; Belongs to the LysR transcriptional regulatory family.
  
     0.463
ADP17410.1
Bacterial regulatory helix-turn-helix protein, LysR family protein 133; Belongs to the LysR transcriptional regulatory family.
  
     0.456
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.