STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16815.1Efflux transporter, outer membrane factor lipoprotein, NodT family protein 5. (493 aa)    
Predicted Functional Partners:
ADP16812.1
HlyD family secretion family protein 2.
 
 
 0.891
ADP16813.1
ABC transporter family protein 59.
 
   
 0.815
ADP16814.1
ABC-2 type transporter family protein 3.
     
 0.790
ADP16811.1
Bacterial regulatory protein, TetR family protein 14.
     
 0.782
ADP16259.1
Efflux transporter, RND family, MFP subunit 6; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.681
ADP13912.1
Efflux transporter, RND family, MFP subunit 1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.643
amrA
Membrane fusion protein AmrA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.611
bpeA1
Periplasmic linker protein 1; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.606
bpeA3
Periplasmic linker protein 3; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.598
ADP19182.1
Efflux transporter, RND family, MFP subunit 8; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.592
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.