STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16818.1Hypothetical protein. (659 aa)    
Predicted Functional Partners:
ADP16819.1
Hypothetical protein.
       0.773
ADP16817.1
YbaK/prolyl-tRNA synthetase associated domain protein 2.
  
    0.708
ADP19533.1
Bacterial regulatory helix-turn-helix protein, AsnC family protein 14.
  
     0.616
ADP18751.1
Outer membrane autotransporter barrel domain protein 8.
  
     0.557
ADP14755.1
Hypothetical protein.
  
     0.543
ADP15830.1
Hypothetical protein.
  
     0.541
ADP15023.1
Tat pathway signal sequence domain protein 8.
  
     0.518
iscU
FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
    0.516
ADP18592.1
NifQ family protein.
   
    0.516
ADP15437.1
Hypothetical protein.
  
     0.513
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.