STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16836.1HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (304 aa)    
Predicted Functional Partners:
ADP16834.1
Fusaric acid resistance protein family protein 1.
 
  
 0.959
ADP16833.1
Bacterial regulatory helix-turn-helix protein, MarR family protein 11.
 
  
 0.910
ADP16835.1
Hypothetical protein.
 
     0.908
ADP16837.1
Efflux transporter, outer membrane factor lipoprotein, NodT family protein 6.
 
 
 0.847
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.780
ADP14772.1
Efflux transporter, outer membrane factor lipoprotein, NodT family protein 2.
 
 
 0.557
ADP16259.1
Efflux transporter, RND family, MFP subunit 6; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.557
ADP13915.1
Multidrug efflux system lipoprotein 1.
 
 
 0.556
ADP14780.1
Efflux transporter, outer membrane factor lipoprotein, NodT family protein 3.
 
 
 0.552
ADP16392.1
Multidrug efflux system lipoprotein 2.
 
 
 0.552
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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