STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADP16850.1Helix-turn-helix domain, RpiR family protein 5. (282 aa)    
Predicted Functional Partners:
dpaL
Diaminopropionate ammonia-lyase.
 
     0.798
ADP16848.1
N-carbamoyl-L-amino acid hydrolase 3.
 
     0.780
dcaS2
N-carbamoyl-D-amino-acid hydrolase 2.
 
     0.752
ADP15466.1
Helix-turn-helix domain, RpiR family protein 4.
 
   
 0.751
iaaA
Isoaspartyl peptidase.
  
    0.541
ADP16846.1
Major facilitator transporter 4.
       0.440
ADP16851.1
Peptidase inhibitor I78 family protein.
       0.416
Your Current Organism:
Achromobacter xylosoxidans
NCBI taxonomy Id: 762376
Other names: A. xylosoxidans A8, Achromobacter xylosoxidans A8, Achromobacter xylosoxidans str. A8, Achromobacter xylosoxidans strain A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.